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Official repository for the ShanEnt analysis package
Assembly
Public/backup repository of the gromacs molecular simulation toolkit
C++
Super simple, super lightweight dna compression tool
SBML model editor and integrator - *very* much in alpha
Make header and class files using a default template. Save ~ 1 min per class...
Matlab
Software tools to analyze data produced from the L1000 project
Part of my dissertation project, a selection of MATLAB scripts for generating and evaluating parameters based on empirical data originally collected by Hendriks et al. This is NOT GENERIC, but specific for a project
Perl
A simple perl script which provides a command line interface unifying all the various unpacking mechanisms for common compression/archive formats on Linux
Python
Take a PDB file and spit out protein sequence in 3 or 1 letter format
Simple base-type based API for the NCBI databases
Package for 2019 workshop!
Python API to access ProteomeScout flatfiles [proteomescout.wustl.edu]
Shell
