BrentLab

Jupyter Notebook

TFPertRespExplainer

 2  1
Predict genes' response to perturbations and explains which genomic factors determine the response predictions.
Nextflow

MultiomicIntegration

 0  1
A nextflow pipeline which integrates multiple omic data streams and performs coordinated analysis
Python

Dual_Threshold_Optimization

 3  1
Dual threshold optimization for identifying convergent evidence: TF binding locations and TF perturbation responses.

TFA-evaluation

 2  2
R

NetProphet_2.0

 12  5
A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.

NetProphet_3.0

 2  0

brentlabRnaSeqTools

 0  1
Shell

dockerize_rstudio_server

 1  0