Pappu Lab pappulab.wustl.edu Github repository for Rohit Pappu's lab at Washington University in St. Louis 20 58 29 C LASSI 15 7 LASSI - Lattice Simulation Engine For Stickers And Spacer Interactions Cython Data-and-Analysis-for-PLCD-Mixtures 2 0 Data and Analysis code used in the following paper: "Phase Separation of Protein Mixtures is Driven by the Interplay of Homotypic and Heterotypic Interactions" Jupyter Notebook Glutamate_vs_Chloride_Clustering 1 0 King-etal-Nucleoli 1 0 This GitHub repository contains the code and data for the manuscript "Macromolecular Condensation Organizes Nucleolar Sub-Phases to Set Up a pH Gradient." Available at SSRN: https://ssrn.com/abstract=4520791 or http://dx.doi.org/10.2139/ssrn.4520791 M4 xdrf 7 4 This directory contains source of the portable data compression library xdrf, which was developed for EUROPORT. MATLAB material_properties 1 0 Data repository and analysis routines used to study material properties of prion-like low-complexity domains as described in https://doi.org/10.1038/s41567-024-02558-1 Python localCIDER 23 14 localCIDER - sequence analysis tool for disordered protein sequences damfret_classifier 2 0 This is a Python package for classifying DAmFRET data based on supervised learning. The data can also be analyzed to allow mechanistic inferences regarding nucleation of ordered assemblies. FIREBALL 2 2 A suite of computational tools for constructing, analyzing, and fitting phase diagrams and coil-to-globule transitions. colgrab 1 0 Script which extracts a number of columns from a text file while ignoring headers. Basically awk for those who can't use awk. PLCD-Data-Repository-and-Analysis-Routines 1 0 Data repository and analysis routines used to study prion-like low-complexity domains as described in https://www.biorxiv.org/content/10.1101/2021.01.01.425046v1 Pyvolution 1 0 simprep 1 2 correct salt concentration for a CAMPARI simulation correct salt concentration for a CAMPARI simulation
