Topp-Roots-Lab

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C++

3D-Sorghum-Inflorescence

 1  1

Gia3D

 1  0
Root3D Skeleton Traits by Olga Symonova. Also known as "skel" or "Skeleton".

rsa-tools

 1  0
External tools used by the GUI for analyzing plant root system architecture

3D_reconstruction

 0  3
Algorithm for 3d reconstruction from rotational image sequence
HTML

TopoRoot

 1  0

Topp-Roots-Lab.github.io

 0  1
Lab website
Java

rsa-gui

 3  4
User-controlled pipeline for analyzing plant root system architecture
MATLAB

Grapevine-inflorescence-architecture

 3  1
Python

3d-root-crown-analysis-pipeline

 3  1
A pipeline to process 3-D volumes (.raw) of maize root crowns. Also known as XRCAP.

python-rawtools

 0  2
Utility library for consuming and manipulating x-ray volume data in .raw format.

taghelper

 0  1
Python scripts that allow synching of fieldbooks, the tagdb, and barcode strings.
R

timeseries_analysis

 0  4
scripts used for analysis of root growth