Washington-University

C

dcm_to_4dfp

0 0
Convert DICOM files into 4dfp

C++

workbench

82 44
Connectome Workbench

CiftiLib

11 6
C++ Library for reading and writing CIFTI-2 and CIFTI-1 files

Java

hcp_functional_qc_xnat_plugin

0 0
XNAT pages required for HCP QC as a plugin

MATLAB

cifti-matlab

15 7
MATLAB code for reading and writing CIFTI connectivity files

Matlab

megconnectome

2 1
MEG data processing pipelines for the HCP Young Adult project

Python

gradunwarp

13 18
Gradient Unwarping in Python

HCP

5 1
Main HCP repo, probably mostly python stuff.

xnat_utilities

2 0
Some utilities for working with XNAT from the command line

hcp_functional_qc_tools

0 0
Python based scripts required for Functional QC Pipeline (aka Level2QC Pipeline) for HCP-IntraDB

monitor-hcp-pipelines

0 1

Shell

HCPpipelines

239 174
Processing pipelines for the HCP

NHPPipelines

12 11
Enhancements of HCP Pipelines for non-human primates

HCPpipelinesSingularity

2 3
Files related to running the HCP Pipelines using Singularity

StructuralQC

2 2

xnat_pbs_jobs

2 1
Scripts to run HCP Pipelines as XNAT aware PBS scheduled jobs

access_hcp_data

1 0
Utilities for access to Amazon S3 HCP OpenAccess data for pipeline running

hcp_db_util

1 0
Scripts for accessing the Human Connectome Project server

hcp_functional_qc_pipeline_customizations

1 1
HCP Functional QC (aka Level2QC) pipeline

at_cmd_utils

0 0
Utility scripts for the at command

CHPC_QuNex_RunUtils

0 0
Scripts and parameters files for running Qu|Nex container on the CHPC

get-data-for-vetting

0 0
Utility scripts to retrieve data from Connectome DB resources and place them in shared directories for examination and vetting

HCPpipelinesRunUtils

0 1
Utilities for running and checking completion status of HCP Pipelines

HCPpipelinesXnatPbsJobs

0 1

HCPpipelinesXnatPbsUtils

0 1

pbs_utils

0 0
PBS Job Scheduler Utility Scripts

Pipeline_Environment_Setup_Scripts

0 0

Pipelines_Testing

0 0
Data management and testing of the HCP Pipelines

RetinotopySkeleton

0 3

wb_shortcuts

0 0
Script for common short wb_command sequences

xnat_pbs_jobs_control

0 1
Control files for the scripts in the xnat_pbs_jobs repository