Washington-University

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C

Convert DICOM files into 4dfp

C++

workbench

80 44
Connectome Workbench

CiftiLib

10 6
C++ Library for reading and writing CIFTI-2 and CIFTI-1 files

Java

XNAT pages required for HCP QC as a plugin

MATLAB

MATLAB code for reading and writing CIFTI connectivity files

Matlab

MEG data processing pipelines for the HCP Young Adult project

Python

gradunwarp

11 17
Gradient Unwarping in Python

HCP

5 1
Main HCP repo, probably mostly python stuff.
Some utilities for working with XNAT from the command line
Python based scripts required for Functional QC Pipeline (aka Level2QC Pipeline) for HCP-IntraDB

Shell

HCPpipelines

225 163
Processing pipelines for the HCP

NHPPipelines

10 11
Enhancements of HCP Pipelines for non-human primates
Files related to running the HCP Pipelines using Singularity
Scripts to run HCP Pipelines as XNAT aware PBS scheduled jobs
Utilities for access to Amazon S3 HCP OpenAccess data for pipeline running
Scripts for accessing the Human Connectome Project server
HCP Functional QC (aka Level2QC) pipeline
Utility scripts for the at command
Scripts and parameters files for running Qu|Nex container on the CHPC
Utility scripts to retrieve data from Connectome DB resources and place them in shared directories for examination and vetting
Utilities for running and checking completion status of HCP Pipelines

pbs_utils

0 0
PBS Job Scheduler Utility Scripts
Data management and testing of the HCP Pipelines
Script for common short wb_command sequences
Control files for the scripts in the xnat_pbs_jobs repository