danforthcenter

undefined's photo
No Language

outreach

 5  4
Repository for Outreach Activities at DDPSC
HTML

plantcv-setaria-molplant

 1  1
PlantCV image analysis scripts used in Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, et al. A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria. Mol Plant. 2015;8: 1520–1535.

plantcv-web

 0  2
PlantCV website repository
Java

PhenoFront

 1  0
LemnaTec front end.
Jupyter Notebook

plantcv-workshop

 15  12
PlantCV Workshops

plantcv-v2-paper

 10  1
PlantCV image analysis scripts used in the PlantCV v2.0 paper

plantcv-binder

 6  6
A repository for interactive PlantCV documentation using Binder

apps-phenotyping

 5  3
The following are scripts and instruction necessary to set up 4 Raspberry Pi Powered Imaging Platforms

plantcv-nappn2021-workshop

 4  3
NAPPN 2021 Conference PlantCV virtual workshop materials

plantcv-seeds

 3  1
Seed phenotyping with PlantCV

phenome2020-workshop

 2  2
Phenome 2020 Digital Phenotyping workshop materials

plantcv-tutorial_leaf_instance_segmentation

 2  1

Eveland_NSF_Outreach

 1  0
Repository for Outreach Activities

plantcv-tasselyzer-tutorial

 1  1

plantcv-terra

 0  1
PlantCV scripts for analyzing data from the TERRA-REF project

reu

 0  1
National Science Foundation Research Experience for Undergraduates internship bioinformatics and phenotyping workshop materials

workshops

 0  1
Donald Danforth Plant Science Center Data Science workshops
Nextflow

bioinformatics

 4  5
The Donald Danforth Plant Science Center Bioinformatics Core Facility public repository
Python

plantcv

 502  240
Plant phenotyping with image analysis

htcondor-tools

 3  0
A collection of scripts for building and running HTCondor jobs and workflows

data-science-tools

 1  9
Data Science Tools

persistent_homology

 1  0
Persistent homology

plantcv-dev-scripts

 1  0
Development image analysis scripts

plantcv-hyperspectral

 1  5
Hyperspectral analysis tools in PlantCV
R

diel-explorer

 1  1
Gehan Lab shiny app to graph JTK Cycle Output

pgwasdbc

 1  0
R Package that handles and maintains a connection to GWAS database.

quinoa-pollen-germination

 1  0

quinoa-trait

 1  0
Gehan Lab Shiny App to Explore Quinoa Phenotype Data

plantcvR

 0  1