- Donald Danforth Plant Science Center
- http://danforthcenter.org
- 43
danforthcenter
Static site files for brachypodium.org
MedPlant RNAseq Database Website
PlantCV website repository
LemnaTec front end.
PlantCV Workshops
The following are scripts and instruction necessary to set up 4 Raspberry Pi Powered Imaging Platforms
PlantCV image analysis scripts used in the PlantCV v2.0 paper
A repository for interactive PlantCV documentation using Binder
Code and notebooks for camelina projects
PlantCV workflows for the Brachypodium ENCODE project
PlantCV scripts for analyzing data from the TERRA-REF project
National Science Foundation Research Experience for Undergraduates internship bioinformatics and phenotyping workshop materials
The Donald Danforth Plant Science Center Bioinformatics Core Facility public repository
Plant image analysis using OpenCV
Seed phenotyping with PlantCV
A collection of scripts for building and running HTCondor jobs and workflows
Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage
Suite for phased clusters discovery, comparison, annotation and to identify miRNA triggers - uses MapReduce model [In review]
PlantCV parallel processing add-on package
R Package that handles and maintains a connection to GWAS database.
Gehan Lab Shiny App to Explore Quinoa Phenotype Data
Gehan Lab shiny app to graph JTK Cycle Output