R

186 R users in St. Louis

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Joshua Ulrich has 1,020 from R repos:
  • quantmod (523 ) Quantitative Financial Modelling Framework
  • TTR (213 ) Technical analysis and other functions to construct technical trading rules with R
  • xts (169 ) Extensible time series class that provides uniform handling of many R time series classes by extending zoo.
SLU Data Science Seminar openGIS Project has 153 from R repos:
  • biscale (58 ) Bivariate Mapping with ggplot2
  • postmastr (25 ) R package for Processing and Parsing Untidy Street Addresses
  • qualmap (12 ) R package for working with semi-structured qualitative GIS data
Chris Miller has 143 from R repos:
  • fishplot (104 ) Create timecourse "fish plots" that show changes in the clonal architecture of tumors
  • readDepth (24 ) R package for inferring copy number from read depth
  • copyCat (15 ) a parallel R package for detecting copy-number alterations from short sequencing reads
The McDonnell Genome Institute has 93 from R repos:
  • sciclone (79 ) An R package for inferring the subclonal architecture of tumors
  • sciclone-meta (6 ) accessory scripts and documentation related to the sciclone R package at genome/sciclone
  • bmm (3 ) R package that uses a variational Bayesian approach to fitting a mixture of Beta distributions
Ha X. Dang has 89 from R repos:
  • clonevol (89 ) Inferring and visualizing clonal evolution in multi-sample cancer sequencing
  • svxplorer (0 ) (No description)
Ryan J. Price has 54 from R repos:
  • loggit (29 ) Modern Logging for the R Ecosystem
  • readit (25 ) [RETIRED] Effortlessly Read Any Rectangular Data Into R
  • RQuest (0 ) Practicing R6 classes by writing a turn-based combat game into an R package
Christopher Lucas has 40 from R repos:
  • MatchingFrontier (17 ) Optimal pruning for imbalance minimization in causal inference
  • translateR (14 ) R Package for Cross-Language Topic Modeling
  • transcribeR (9 ) R Package for Automated Speech Recognition
Li Ding's Lab has 38 from R repos:
  • PanCanAtlasGermline (28 ) (No description)
  • gatk4wxscnv (5 ) Pipeline for WXS CNV using GATK4
  • MIRMMR (2 ) Microsatellite Instability Regression using Methylation and Mutations in R
Austin F. Frank has 33 from R repos:
  • R-hacks (30 ) useful bits of code for programming and analysis in R
  • bgm-jags (3 ) Using JAGS to re-implement examples and problems from Lee and Wagenmaker's "Bayesian Graphical Modeling"
Ben Mansfeld has 29 from R repos:
  • QTLseqr (29 ) QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
Scott A. Lewis has 16 from R repos:
  • ExpressionDB (15 ) App for hosting gene expression/ontology data with Shiny
  • Circa-in-Silico (1 ) Application for generating "in silico" circadian rhythms
  • CKDapp (0 ) chronic kidney disease data set
Ben Gonzalez has 16 from R repos:
  • Text-Analysis-App (7 ) This repository contains my grad-school project for a text analysis app.
  • sqlapp (5 ) (No description)
  • facebookanalysis (1 ) Package for analyzing emotion in Facebook messages.
The McDonnell Genome Institute has 13 from R repos:
  • CummeRbund (2 ) Unofficial repo for software vendoring or packaging purposes
  • r-cran-ggplot2 (2 ) Unofficial repo for software vendoring or packaging purposes
  • r-bioc-cn.mops (1 ) Unofficial repo for software vendoring or packaging purposes
Tae-Hyuk Ahn has 11 from R repos:
  • LONGO (6 ) Gene Length-Dependent Expression Analysis Tool in Neuronal Cells
  • iCAT (5 ) iCAT: Immune Cells Analysis software Tool
  • Rchimerism (0 ) Interactive R Package for Automation of Chimerism Test Data Analysis
theHumanBorch has 11 from R repos:
Branson Fox has 9 from R repos:
  • stlvacancy (5 ) A reproducible dataset for estimating vacancy in the City of St. Louis
  • map_help (1 ) Functions, Data, Links and other useful resources for web mapping and mapping in R
  • ARCOS_Scrape (1 ) The DEA releases very large PDFs with valuable information about drug distribution, this repo makes that data available for analysis.
yiming-kang has 9 from R repos:
  • NetProphet_2.0 (9 ) A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.
Open STL has 8 from R repos:
  • health-hack-weekend (8 ) Data, resources, & wiki for OpenSTL Health Hack Weekend 1/16/2015-1/19/2015
Bruno Vilela de Moraes e Silva has 7 from R repos:
  • letsR (6 ) Package letsR
  • sampler (1 ) Functions to generate overdispersed and aggregated sampling designs in the geographic, phylogenetic or any trait/variable space.
  • normalizer (0 ) (No description)
Colby Chiang has 6 from R repos:
  • cnvgram (4 ) Draw CNV diagrams
  • voir (2 ) Tools for graphically viewing data
Steven Sommer has 6 from R repos:
  • R_Finance (6 ) R scripts related to finance. These scripts will be clones or adaptations of the works of the Systematic Investor and QuantStrat TradeR blogs. My focus will be dynamic Asset Allocation and dynamic Risk Parity algorithms.
Ren-Huai Huang has 6 from R repos:
  • rstarating (3 ) (No description)
  • pldfit (3 ) Protein-ligand biosensor data fitting
  • blidata (0 ) BLI Experiment Data
Jared Andrews has 6 from R repos:
  • EZscRNA (3 ) Convenient, high-level functions for EZ(-er) scRNA-seq analysis
  • OneLinerOmics (3 ) One liner analyses and visualizations for bulk RNA-seq and ChIP-seq data
  • AndrewsBCellLymphoma (0 ) Companion package to Andrews et al (2019) containing functions used to analyze data.
Tychele Turner has 6 from R repos:
Christopher Prener has 5 from R repos:
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