R

339 R users in St. Louis

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Joshua Ulrich has 1,327 from R repos:
  • quantmod (670 ) Quantitative Financial Modelling Framework
  • TTR (284 ) Technical analysis and other functions to construct technical trading rules with R
  • xts (201 ) Extensible time series class that provides uniform handling of many R time series classes by extending zoo.
theHumanBorch has 322 from R repos:
  • scRepertoire (177 ) A toolkit for single-cell immune profiling
  • escape (66 ) Easy single cell analysis platform for enrichment
  • utility (65 ) Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR
Chris Miller has 197 from R repos:
  • fishplot (147 ) Create timecourse "fish plots" that show changes in the clonal architecture of tumors
  • readDepth (26 ) R package for inferring copy number from read depth
  • copyCat (23 ) a parallel R package for detecting copy-number alterations from short sequencing reads
Kevin Blake has 182 from R repos:
  • NatParksPalettes (182 ) Color palette package inspired by National Parks.
  • PathotypeR (0 ) DEC pathotype assignment of E. coli genomes in R
Chris Prener has 137 from R repos:
  • biscale (103 ) Bivariate Mapping with ggplot2
  • censusxy (15 ) R package for calling the U.S. Census Bureau's Geocoder API
  • qualmap (14 ) R package for working with semi-structured qualitative GIS data
Ha X. Dang has 123 from R repos:
  • clonevol (121 ) Inferring and visualizing clonal evolution in multi-sample cancer sequencing
  • trees (1 ) Simulate and plot trees in R
  • sciclone (1 ) An R package for inferring the subclonal architecture of tumors
The McDonnell Genome Institute has 117 from R repos:
  • sciclone (101 ) An R package for inferring the subclonal architecture of tumors
  • sciclone-meta (6 ) accessory scripts and documentation related to the sciclone R package at genome/sciclone
  • bmm (4 ) R package that uses a variational Bayesian approach to fitting a mixture of Beta distributions
SLU Data Science Seminar openGIS Project has 103 from R repos:
  • postmastr (34 ) R package for Processing and Parsing Untidy Street Addresses
  • tidyseg (12 ) R package with tidy approaches for calculating measures of segregation
  • covid_daily_viz_archive (9 ) Daily tracking of Missouri COVID Data
Li Ding's Lab has 65 from R repos:
Ryan J. Price has 59 from R repos:
  • loggit (34 ) Modern Logging for the R Ecosystem
  • readit (24 ) [RETIRED] Effortlessly Read Any Rectangular Data Into R
  • stl_rug (1 ) Materials for STL R User Group presentations
Obi Griffith has 56 from R repos:
Ben Mansfeld has 55 from R repos:
  • QTLseqr (54 ) QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
  • CMD2_project (1 ) Scripts for genetic mapping of CMD2 locus and RNAseq for the CMD2 project
  • drat (0 ) Drat R Archive Template
Christopher Lucas has 47 from R repos:
  • MatchingFrontier (18 ) Optimal pruning for imbalance minimization in causal inference
  • translateR (17 ) R Package for Cross-Language Topic Modeling
  • transcribeR (10 ) R Package for Automated Speech Recognition
Austin F. Frank has 35 from R repos:
  • R-hacks (32 ) useful bits of code for programming and analysis in R
  • bgm-jags (3 ) Using JAGS to re-implement examples and problems from Lee and Wagenmaker's "Bayesian Graphical Modeling"
Keith Lohse has 20 from R repos:
  • LMER_Clinical_Science (8 ) Linear Mixed Effect Regression for Clinical Scientists
  • ReproRehab (3 ) R programming exercises for learners enrolled in ReproRehab
  • LMER_v_RM_ANOVA (3 ) Comparison of linear mixed-effect regression to repeated-measures analysis of variance for dealing with longitudinal data
Tae-Hyuk Ahn, Ph.D. has 19 from R repos:
  • MegaR (7 ) megaR: An Interactive R Package for Metagenomic Sample Classification and Disease Prediction using Microbiota and Machine Learning
  • iCAT (6 ) iCAT: Immune Cells Analysis software Tool
  • LONGO (6 ) Gene Length-Dependent Expression Analysis Tool in Neuronal Cells
Scott Lewis has 17 from R repos:
  • ExpressionDB (16 ) App for hosting gene expression/ontology data with Shiny
  • Circa-in-Silico (1 ) Application for generating "in silico" circadian rhythms
  • CKDapp (0 ) chronic kidney disease data set
Nathaniel G. Mahieu has 17 from R repos:
  • mz.unity (14 ) mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  • warpgroup (3 ) The warpgroup algorithm takes multiple LC/MS samples and determines: 1. Segregation of those peaks into compound groups; 2. Per-group consensus integration bounds; 3. Integration bounds for samples in which no peak was detected.
  • enrich.no12c (0 ) Proof of concept untargeted enrichment detection
The McDonnell Genome Institute has 14 from R repos:
  • r-cran-ggplot2 (2 ) Unofficial repo for software vendoring or packaging purposes
  • CummeRbund (2 ) Unofficial repo for software vendoring or packaging purposes
  • r-cran-chemminer (1 ) Unofficial repo for software vendoring or packaging purposes
Branson Fox has 13 from R repos:
  • hl7r (5 ) An HL7 Parser for R
  • stlvacancy (5 ) A reproducible dataset for estimating vacancy in the City of St. Louis
  • map_help (1 ) Functions, Data, Links and other useful resources for web mapping and mapping in R
Brent Lab has 13 from R repos:
Haojia Wu has 12 from R repos:
Mariana P Braga has 9 from R repos:
  • pieridae_hostrep (6 ) Analysis of host repertoire evolution in Pieridae butterflies
  • evolnets (3 ) R package to reconstruct ancestral networks inferred with RevBayes
Ren-Huai Huang has 8 from R repos:
Open STL has 8 from R repos:
  • health-hack-weekend (8 ) Data, resources, & wiki for OpenSTL Health Hack Weekend 1/16/2015-1/19/2015
  • stldata (0 ) R package containg St. Louis related datasets for teaching
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