495 R users in St. Louis
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Joshua Ulrich has 1,713 from R repos:
Kevin Blake, PhD has 270 from R repos:
- NatParksPalettes (266 ) Color palette package inspired by National Parks
- ConPosER (3 ) Identify conserved positions in amino acid multiple sequence alignments in R
- GrowthRateR (1 ) Calculate bacterial growth rates from plate reader kinetics data in R
Chris Miller has 231 from R repos:
Chris Prener has 159 from R repos:
Ha X. Dang has 151 from R repos:
The McDonnell Genome Institute has 142 from R repos:
- sciclone (123 ) An R package for inferring the subclonal architecture of tumors
- sciclone-meta (9 ) accessory scripts and documentation related to the sciclone R package at genome/sciclone
- docker-rnaseq (4 ) A fat docker image for running RnaSeq
Li Ding's Lab has 123 from R repos:
- PanCanAtlasGermline (44 ) (No description)
- ST_subclone_publication (18 ) Code for spatial subclone paper
- ccRCC_snRNA_analysis (10 ) (No description)
theHumanBorch has 123 from R repos:
SLU Data Science Seminar openGIS Project has 112 from R repos:
- postmastr (38 ) R package for Processing and Parsing Untidy Street Addresses
- tidyseg (14 ) R package with tidy approaches for calculating measures of segregation
- covid_daily_viz_archive (10 ) Daily tracking of Missouri COVID Data
Ben Mansfeld has 84 from R repos:
- QTLseqr (82 ) QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
- mfusca_figs (1 ) Malus
- CMD2_project (1 ) Scripts for genetic mapping of CMD2 locus and RNAseq for the CMD2 project
Ryan J. Price has 63 from R repos:
Obi Griffith has 60 from R repos:
- biostar-tutorials (50 ) Code for biostar tutorials - mostly R and Perl
- Rtoolbox (8 ) Modeling precision treatment of breast cancer
- RFRS (1 ) Random Forests Relapse Score
Christopher Lucas has 52 from R repos:
- translateR (21 ) R Package for Cross-Language Topic Modeling
- MatchingFrontier (18 ) Optimal pruning for imbalance minimization in causal inference
- transcribeR (10 ) R Package for Automated Speech Recognition
Keith Lohse has 50 from R repos:
- LMER_Clinical_Science (22 ) Linear Mixed Effect Regression for Clinical Scientists
- ReproRehab (8 ) R programming exercises for learners enrolled in ReproRehab
- LMER_v_RM_ANOVA (6 ) Comparison of linear mixed-effect regression to repeated-measures analysis of variance for dealing with longitudinal data
Haojia Wu has 37 from R repos:
- plot1cell (36 ) A R package for advanced single cell data viz
- Mouse_DKD_Rx_Atlas (1 ) (No description)
- Bulk_RNAseq_analysis_pipeline (0 ) (No description)
Austin F. Frank has 36 from R repos:
Tae-Hyuk Ahn, Ph.D. has 24 from R repos:
Scott Lewis has 21 from R repos:
- ExpressionDB (17 ) App for hosting gene expression/ontology data with Shiny
- Circa-in-Silico (2 ) Application for generating "in silico" circadian rhythms
- CKDapp (1 ) chronic kidney disease data set
Branson Fox has 19 from R repos:
- hl7r (11 ) An HL7 Parser for R
- stlvacancy (5 ) A reproducible dataset for estimating vacancy in the City of St. Louis
- map_help (1 ) Functions, Data, Links and other useful resources for web mapping and mapping in R
Donald Danforth Plant Science Center has 19 from R repos:
- pcvr (5 ) R functions for use with plantCV output
- FiReMAGE (3 ) (No description)
- syncomBuildR (2 ) (No description)
NeuroGenomics and Informatics at Washington University. St. Louis has 18 from R repos:
- NatMed_2025_GNPC (10 ) (No description)
- snuclRNA-seq (5 ) Resources for processing and analyzing single-nuclei RNA-seq
- Neuron_2025_proteomics (2 ) This repository contains the code for bioinformatics analyses described in the article "Multi-cohort cerebrospinal fluid proteomics identifies robust molecular signatures across the Alzheimer disease continuum"
Tychele Turner has 18 from R repos:
- ElGenomaPequeno (9 ) El genoma pequeño - analysis workflow for "the little genome." This repository holds a computational workflow to analyze the mitochondrial genome.
- plot-protein-with-conservation (4 ) Plot Protein: Visualization of Mutations with Conservation
- exome_class (1 ) Codes for exome sequencing class being taught by Tychele N. Turner, Ph.D.
Brent Lab has 17 from R repos:
- NetProphet_2.0 (13 ) A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.
- NetProphet_3.0 (3 ) (No description)
- GOeval (1 ) Gene Regulatory Network Evaluation Using Gene Ontology
Nathaniel G. Mahieu has 17 from R repos:
- mz.unity (14 ) mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
- warpgroup (3 ) The warpgroup algorithm takes multiple LC/MS samples and determines: 1. Segregation of those peaks into compound groups; 2. Per-group consensus integration bounds; 3. Integration bounds for samples in which no peak was detected.
- ExData_Plotting1 (0 ) Plotting Assignment 1 for Exploratory Data Analysis
Christopher Maher's Lab has 14 from R repos:
- SV-Hotspot (11 ) (No description)
- TMECircDB (2 ) (No description)
- PRAD_EMSeq (1 ) (No description)
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